It isn’t a DNS validation issue, i think its something deeper…
I’ve removed the IPv6 DNS records… still getting the validation status error.
While I again see the entries into the access.log on ipv4.
Would’ve been nice if there was a better way to seeing an error. Now its just a error but doesn’t point a direction 
After some more testing i see that it only appears when i do the letsdebug test.
There aren’t any 200’s shown in the acces.log when i request the log through the interface or v-add-letsencrypt-domain.
Could it be the user is broken or something?
I’ll try to remove the user add it from scratch to see what the results are going to be. Will post the results.
Edit 1 + result 1:
Tried to remove the domain from the user, added the domain again to be sure everything is “default” even then it doens’t show any 200’sin the fresh and empty domain.log.
It looks like there isn’t even a request for letsencrypt being made?
Going to test it on another user with another domain…
** edit 2 results **
I’ve tested it on another domain and it seems to be working. Weird, maybe it has to be due to the fact that there were some IPv6 dns records that has been removed. Will give it some time and see what happens if i request the LE later.
Still ain’t giving up 
** Edit 3 (fast results
)
After removing the user, the LE cert was being requested successfully. So it has to do something with the user or configuration of the user?
I am going to try to enable IPv6 and see what happens if i request the cert again from a newly created user and newly added domain.
Trying to find the solution that could help you guys implement IPv6 and LE 
** Good results **
After adding Ipv6 again to the DNS, checking if the records are already available and yes ( TTL on 300 )
I’ve succesfully requested the certificate even when i got IPv6 enabled. Curious why it does work now.
I’ve got the backup of the previous user, im considering to compare them to find out why this happened… but i don’t know what the important configs are for hestia.
For now my conclusion is that IPv6 is easy to enable just by adding the wildcard ipv6 adres to the templates. Just watch out that you dont do v-update-templates cause that overwrites the custom edits in /usr/local/hestia/data/templates…/php-fpm/default.tpl and such